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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC4F6.05c
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFCSLFHVL SFCCTLAYAV PKSQFLQLHS LSNAIPVEWK WYGSVDEDSG YVYLTSKDSN  60
   61 EARSGSLWST SVLRQVGWQL STSFVAHVSE NENTFFAIWY TSAVGSEGPV FGASDKWDGL 120
  121 LISQEIDQTG KIFVRGYLND KSFELAQFTD PDLPPFAKCT IESSPEALNN IILKYGDQSG 180
  181 LELFVNDKPC FQVKDVILPQ GYYFGVSSQS TSAKDLVALS NLNILPPDTS NNENLNPTSN 240
  241 TKQSVGDNTS PQTVIDTEGL NAIKADLAKL FNLVESQRQK MDSLHFALTN ALERLNDISS 300
  301 TSQFPSERFN ALEKLLHDSL SAQSSTADGT SKHLAEFEKE IKKAMGNAYS PYNLTNFMVF 360
  361 LLLGAIVSYG IMLVRRDRRR HKYL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle