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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FZO1_SCHPO
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSARQLSV AEQNGESGRL NNGYTSNNIQ QYKDETNRHQ FEYNQNRNQL LRSIHIIQNL  60
   61 LNELDNYVDR SDCLFHSVWR TDKEKSKFSG NYYPFSPSKM NVITIDLSLR SSSTADEKLI 120
  121 SQLGEEAHES LLKVHIEKAN KHLFSLFSRV EDTSSKILIT GDLNAGKSTL CNALVHKDIL 180
  181 PEDQQPCTEV FCEVHDAELN DGKDCVHAIP HGLTYSHTDS STYKVFPIED LKRLVYETEN 240
  241 WSMLIVYVND GRPAHESLLH NGITDIALID APGLNTDSMK TTSVFACQEE IDVVVFVVNA 300
  301 ENHFTLSATD FLRNASTEKS HIFIIVNKFD NIRDKERCKR LILEQIHTLS PGTFADAKDL 360
  361 VHFVSCRVAR DPNNREDALY SSFFQMENSL RSFILENRSK SKLAPVRRYL SGLVGDILNI 420
  421 CEYNIKLIDF DINHLQQRLT DLSPKFRKVK HEQQFTYQKN ESLVEATVQS ISQHTHSELE 480
  481 DAIDSLGSFA SVKYSGFFFA YQYAISVRDA MQQYLEEKLL ESEDYARKRT EEAVLCIQKD 540
  541 VKDNFDSAVL PVFHANQMFI KKHRLQLQKH FRFELGLLDF IDLDLTERLG TWSASLSTIL 600
  601 LVLGKTTPSF TTLGAFTGNL GYPIFKYFQN NSLQHLLVPV LGLASICVFG YVIYDIPRAL 660
  661 PLKVAEKIKK SLRETDFCHN ASIWIGTESR KVLNIPLNDL RRMFHQQWDK QRETISVAEN 720
  721 DLRICQKARK FFGEIESRTR EAKKKIMMVQ LEGCDINY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle