YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAPB24D3.07c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFVWTLLG ALSLGSLTTA YGANASNSSV PTPDNTLVVS YTNTSCYTSG PLSPDTRFNR  60
   61 TTRGTFSKVR DALKFRLNGP IHHWDIANEL FDTALGVEII DTQYGINNRT SRDWCTAVSA 120
  121 LEKGDLIEFA AAFTAFDDVN PTKEVVPDAL VGTLALWAKY SYEYDLTSIV SLFGKNWTVD 180
  181 ELGWGTYIAH SLNEISSNTT GAANATLFID TQTKSDCYKL ASTIESWKYA PLSAFPNYGP 240
  241 FYIYGQCVAT FTSGYSPLVE PAFTFASALN TTLNSFPNGT LPTQTQVVGD IGVKFLQYFA 300
  301

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	300	0.99