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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tim50
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNRSLLFRN LRLARPRPFL PLVGKRFVTE KSQSQEEKDT SKITENAKEE VKRDTSSLAK  60
   61 ESLKLLDLNG LNDESYTGDP GKGPEYTSST MLKREKQARY AFWGFLGLTG GGLLYYGRRY 120
  121 GPDEKELEKQ YPAAGYSPSD WWNRVKARTN NFFSYYQEPA FEKLLPDPLP EPYNRPYTLV 180
  181 LSLDDLLIHS EWTRQHGWRT AKRPGLDYFL GYLSMYYEVV IFTRQYLATA KPIIDKIDPY 240
  241 HVSISAVLTR ESSKYEKGKV IKDLSYLNRD LSRVIMIDTN PESWSKQPDN AIAMAPWTGN 300
  301 PKDKELVGLI PLLEFIAIMD IKDVRPVLKS YQGKNIPLEY ARREEKLRTK LIEDWNEKKK 360
  361 KGSSFLFGGR SVSEEPPKLI IDIQRERQKA AYAEFKKYID ENGPKMLEEE KAREAEQKTS 420
  421 IFNLLFHPEE VQQQQLEQMQ QQQFSPETNA SK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle