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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC21C3.03
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPSANSRFA FIIQRNYIPV VNSQNTRWKR LCGTQSVWSP YKKKHVLVNR LKHISLFPKP  60
   61 IFARKFTTRQ KSEDQKQWRI LRITFLVLPF TVGGLWILYR VKNRKNNIFS FDELELEERS 120
  121 NRPRSIFGKI KQFFNILLRS FNLFIIFSPI IITLPFIALI SFLHLRSLSS LTVSIWLRFL 180
  181 VTQLERAGAT FIKLGQWAAS RTDLFPPAFC KTLSKLHSHV TPHSLAYTQS VICKTYKVES 240
  241 IEEIFVNFNP IPIGVGAIAQ VYTATIKKAA TQQDNSYFTS MLQSIGFRQK NISDAPVTQD 300
  301 VAIKVLHPNV EKYISLDLQI LGFFAKLINL VPSMKWLSLP DEVKVFGAML NQQLNLHYEA 360
  361 LHLNQFRLNF RGNRYVEFPA PYDDYTTNQI LLEDYMPGIP LSAFLKHKSG PFNKLLANTG 420
  421 NNALFQMLIV DNFTHADLHP GNVLVKFYKG IPKTIFNQDN EINDSIYKIL STCSTEEWDS 480
  481 AMEELNILGY RPTLVFLDAG LVTKLSTQDQ KNFLDLFQAV LTFHGYEAGL LMVERSRQTE 540
  541 RVINKDIFAL KMEHLLNEIQ KSTLSLKSLQ IGTILQEVMT MAREHHVRIE ANFANTVLSI 600
  601 LLVEGAGRQL YPEMDLLSNA TPYLRSASSK SNVSLTNPMV QLWIALEARQ FLLLSTSKET 660
  661 VEKWVKSDMI APNI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle