YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19113877
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPHLILPAI GSSKVRTMVL PFAFVGFFIF PICLASLLDW NDAYEYPKYS FEWSNVSILE  60
   61 GDIDSIKEKT EKTKLSSLFY AGKHEYFCVY PNASLIKQNS TTEPSYDLQE LRIQGTEKIN 120
  121 ELANVFLIEN RGYWTYDYVY GQHVRQYHLE PQQGSDKVLA NPMYILGTAP NTQTKKNLEE 180
  181 NWAIGFVEGK AYLQTTFRNG TMCDITKRPR HVILSYECST NSDTPEITQY QEVSSCAYSM 240
  241 TIHVPGLCSL PAFKIQEDIP SEKIVCYNVI KEKSNEVDHK DSQHVVDEVA QTSPPEVKEV 300
  301 ETQSMMIFDD TNTLGFYPCS SV

Type	Start	End	Confidence
Signal Peptide	1	35	0.60
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	322	0.94