YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC323.08
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQELQYDVVL LQKIVYRNRN QHRLSVWWRH VRMLLRRLKQ SLDGNEKAKI AILEQLPKSY  60
   61 FYFTNLIAHG QYPALGLVLL GILARVWFVM GGIEYEAKIQ SEIVFSQKEQ KKLELQSQDD 120
  121 IDTGTVVARD ELLATEPISL SINPASTSYE KLTVSSPNSF LKNQDESLFL SSSPITVSQG 180
  181 TKRKSKNSNS TVKKKKKRAR KGRDEIDDIF G

Type	Start	End	Confidence
Non-Cytoplasmic	1	69	0.81
Transmembrane Helix	70	89	0.68
Cytoplasmic	90	211	0.55