YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mug180
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLSLLYRI LTLPIILVGT TILYFTIGTN FPHDELRHNL LSTLFCSSML HLSKGLTVKD  60
   61 VRIFFHDSIG STLLKNRKKL NSENELPNYG EKFTHKYDNQ DMPDSVWLAK VNGMTKSDPI 120
  121 ILHLHGGMMA LPYDKVILVG LSNLYKLFST TMNRPPSILL VDYSLVSQGY TYPKQVRECL 180
  181 NVYQVLISKG FRNITVLGES AGGTLILSFL YQISELSKLN KVVWPKGVAL ISPWLDLTNA 240
  241 KKIGSYRAND GLDVICYETL NRFGKAYVNN EESLFTSSVV NINMNCDISI WSKIPPIQDG 300
  301 KVLVLFGENE VFRDEILSWT SKIGLLKAYP NRVLMDKQGI HIGLFLEESP SIGPGMTNLD 360
  361 IWKKKFSVNS LYTFLRETFE E

Type	Start	End	Confidence
Cytoplasmic	1	6	0.87
Transmembrane Helix	7	28	0.89
Non-Cytoplasmic	29	381	0.82