YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM21_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRTIQRQSA TRFSSALVQR RLYSLASDSL NKQRKPQEEG RLARIFKDPS NKAWKDLTAP  60
   61 QKAYRTSANI GNFSIVIFGG GVFGLIIYAL VTSIWKGEAH YGDEAFELLK ANEECRYVFG 120
  121 DHMKALGEAT HPLRRTHGIL TSRVWDHHGV EHLVLQFHLI GNERKGHVFG RLVNVQGDYK 180
  181 WEYLFVDVAN YGKIIIFDHT NSVRQQHKNF GLWGSLKNIT WGN

Type	Start	End	Confidence
Cytoplasmic	1	69	0.78
Transmembrane Helix	70	91	0.88
Non-Cytoplasmic	92	223	0.82