YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fet5
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKVAAFVCG VASSGKSTFC GALMSYMKSV GRSCHLVNLD PAAENFEWEP TVDIRDLISI  60
   61 DDVMEELDYG PNGGLIYCFE FLMENLDWLN EEIGDYDEDY LIFDMPGQIE LYTHVPILPA 120
  121 LIRHLQVTLN FRPCAVYLLE SQFLVDRTKF FAGVLSAMSA MVMMEVPHIN LLSKMDLLKD 180
  181 NNNITKAELK RFLNTDPLLL TGEINETTNP KFHELNRCIV QLIDDFNMVN FLPLESGNEE 240
  241 SVSRVLSYID DATQWYEDQE PKDPDRFEAD DLEDDE

Type	Start	End	Confidence
Signal Peptide	1	20	0.92
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	276	0.95