YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC323.01c
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRAANGFRI SVRNTAVCLA PNFRQLKGFS IINLGSLQYF QCASPQSIGG KSNLKQLQWP  60
   61 KPPKNILILK KRMDERVDHC FETLVQHLQQ TYPDICIITE TDVAKKFSYL NLYTWTEISD 120
  121 LEQKVDAIIT VGGDGTILHA ASLFARSGMP PILSFSLGTL GFLLPFDFGS FQTAFADFYN 180
  181 SRSFVLMRMR LRVAMKTKLY NESIYAMNEM HIHRGLSPHM AVLKVFVNDK FLTEAVADGL 240
  241 IISTPTGSTA YSLSSGGPIV HPSINALLLT PICPNSLSFR PVLFPDTFKI SIETSNKSRV 300
  301 RPQLSIDGRP LGLTDIGQRI DITSVKDNAI PCIIRSHKED DWVSDIVSLL RWNHPFHRKG 360
  361 W

Type	Start	End	Confidence
Cytoplasmic	1	147	0.60
Transmembrane Helix	148	166	0.53
Non-Cytoplasmic	167	361	0.80