YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC1348.07
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRDTRNVDL ERGLELCKPE KVNKQNLFTN IVKPQKDKIN IKTDKIKFFL NNLFTEFSKF  60
   61 HDSCYPDGRI STRSKLRWPL LIIWCILIVF AIDKNFEVKD FLSIWINESF INENRFYSEI 120
  121 WGPIAIYICL FILLLLGLIY CSKIVVKAIP LISIVIAAVV VIIAVAMVKI LYICHWLIYK 180
  181 ILILAFGIKV KPLGDTLPTH NGETGSHSKA TVGSDIEQIE FQNMPTPVKK

Type	Start	End	Confidence
Cytoplasmic	1	77	0.97
Transmembrane Helix	78	96	0.89
Non-Cytoplasmic	97	119	0.93
Transmembrane Helix	120	141	0.91
Cytoplasmic	142	150	0.71
Transmembrane Helix	151	173	0.89
Non-Cytoplasmic	174	230	0.71