YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AIM19_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKELRKSY FQRIYQSYIP AYAFGGALIA SVPRAFKRPY GGPFVPGCLL CGGFNAIGGL  60
   61 AIASGDLTNG SGICTAWSIA YLMINATKSI KSFRLYPIAL TTFATANAVG YGKTFMNEY

Type	Start	End	Confidence
Cytoplasmic	1	13	0.83
Transmembrane Helix	14	36	0.73
Non-Cytoplasmic	37	51	0.54
Transmembrane Helix	52	84	0.68
Cytoplasmic	85	92	0.77
Transmembrane Helix	93	112	0.75
Non-Cytoplasmic	113	119	0.61