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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC825.02
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSQWYTLT APLLISSLYT VNAANDLRGV ASDKSDLYKP DAKGNWKCLG SDKLISFNQV  60
   61 NDDYCDCPDG SDEPGTSACH NGKFFCKNTG YISSYIPSNR VDDTVCDCCD GSDESLIKCP 120
  121 NTCAQKAREY LATLEEHNRL VKNGLKIREQ WALESAKKTD EVKARYKEIS DSLVAVSAEK 180
  181 TQLSEKVEKM KRSTDLGAEA VLPLDFQDLR VALLSLVDER NEMQERLDIL TNLLDELTLL 240
  241 YETDKFDETM KEAILSFEDL KEQEIRRKVS SDDVHNYLES CNNHLSMLTG PSEDITFSSL 300
  301 IKDIKKILNS LVWNIKLSLI NFGILSPSAS STPLTDSESY RRFEAAQRDL DAAEENEKSL 360
  361 EKEHTKLMHE LEYHHGWDLY RAIKGMETKR EIGGYTYKVV FYENVFQDSI LLGNFASQEG 420
  421 NVLKYENGQS CWNGPHRSAI VTVECGVENE IVSVLEAQKC EYLIKMKSPA ACSPDQLKQS 480
  481 LLNTQNSANE NAVNGMEDKE SSVDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle