YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC27B12.07
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLLRKAID VNRSRITLHG IKVHSINTFR LIPYSLSLTK QIRFYASEGT DAGEMEKGLS  60
   61 VVNANHENRP FRDLEGYHFN TFTFLKTLMD KGYTEKEAEG LLEVTNMFVT DMLRHSHLNY 120
  121 LSEADFENCS YLFRTALSEL RSEKINMRKD QISSLRSGLF SNQREVESLE QLVHEQLNKL 180
  181 NTESKMEFEN RKNDTKNEVQ QLSARIVELH NLLAVSLGKL RAENERQKWD QIRKAAGVVM 240
  241 AFTGFLVLVI PFGLGVRSRK KEKQDELDNL GSFNLDNKRD DYTDTNLSHM

Type	Start	End	Confidence
Non-Cytoplasmic	1	234	0.70
Transmembrane Helix	235	256	0.90
Cytoplasmic	257	290	0.67