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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC830.03
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRQRIESS NVPLSAFAVR QLTLSKAARK KDNSSGKKRS VSEEESQDKY EDEMKTEGEF  60
   61 PSYKHTLVQV VVPGVDHRTK LHSESSKNDS EITPDINRSK VNPQEYSEFS VASPQTISPS 120
  121 LPLNLDDETV SENVPHSPQS SNDAIPVIKI TEENSFRVKD TLYVGLHKDQ KLAMVGTFIF 180
  181 RSVRGKFQLF GATYSSACMS WFPLNAPLAF ATPVFSAIDN ALPAMQISEY EEDSLNLRSF 240
  241 AVPSYSPKEH EYELEPKDIL PNFETVIAFR ENENGLSKIA RVLPFAKRLF SFKNLLQDAS 300
  301 SISNNFEITP ESWCSFSNQL LFSTSKSDYV VPRLMVCGPK GSGKSSFSRY ITNRLLQQYR 360
  361 HIAYLDLDPG QPEVVPSGHI SLYYINSPLQ GPVFARMLFP TYMLRLHLGD ISPQKDPDHY 420
  421 IACVTRLFAE YKDYIFNQEI SQKEIIPLII NCPGWIRGGG AELLSSIVDI CQPTEVVYMS 480
  481 REDMKSSHRE KKSIYQHKEY MPDFLSSRDE FQLTLLESTW QYLPDPNVNK VTSADNRMLG 540
  541 LLSYLYFNCN LQRWDFTTSL TACQPIATAF KGSSKGIDAV NIIGEPLNVN DVAKTINGTL 600
  601 MALYACDTAS LDNSNTQRIV SSPEGIPLII NDGLPLDPNT SHCLGLIVLR TIDLKRNEFH 660
  661 FVGPLNLELI KDAYAKSLKI VLERGRLELP VYAMLDHRLA QYSELPYLDR NHDRVAVGAH 720
  721 RRRVRRNIIR RSTFVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle