YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPCC1281.03c
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHINEETDWI DLVKPALAKK PKKIVDNSDK FPTPRGFQQK SLVSKNIHSG NSASSTSIFA  60
   61 KREEELQKDL LLKKAWELAY SPLKQIPMNA ILAYMSGNSL QIFSIMTTLM LLVNPLKAIT 120
  121 STGSAFTPFK GTHPGTLWPA MGAYILFQLL LMGIGVYKLQ RMGLLPTTTS DWLAWEVSKV 180
  181 FMDRSYGPSK TVL

Type	Start	End	Confidence
Cytoplasmic	1	90	0.98
Transmembrane Helix	91	113	0.79
Non-Cytoplasmic	114	135	0.81
Transmembrane Helix	136	157	0.90
Cytoplasmic	158	193	0.96