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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC4F10.16c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLINFDAI SSLKSSLHGL SICAFNHLHH VPQHNGSLAH EGPTNQTDYS SRHHESQFSQ  60
   61 EAHAEQRSRD DEEANSFEGS CNNSDQSWTS RVTSKKNEAG TESGDASVRR IYVTSIPEEH 120
  121 RHLPSQWFPS NKIRTTKYTP VSFIPKNLWN QFKNIANAFF LFVTLLQCIP LFCPEHLGLS 180
  181 FIPLSVILLT TAIKDGIEDY RRCVLDKKFN NTLTWKLVGF NNANALGEHI GLWRKLKKFI 240
  241 SHTVADMSYC LKNSGISSGL ATLTVDNISH RHSLESDSAF TLSSVSQDSL EIHEIGNSGP 300
  301 SNSFSVIQEQ STGSSNAKFE RVCRKSLLVG DIVKVLADEA IPADLLILST ENSNGVCYVE 360
  361 TKNLDGETNL KDKYALCSTK CCKSEYRCSA ASFWVECEQP HADLYSLNGV VKAPGAVQSP 420
  421 SESTNGRKIH EEPFSISNVL LCGCTLRNSK WVIGLVLYTG SETRIQKNRG LTPSKRSRIT 480
  481 RDLNWTIILN FLLLFAMCLF SGVLRSIYSA QNNSARVFEL SKNSNTAPAH GIISIFTSLI 540
  541 LFQNLVPISL YITMDIVRSI QSYFIFSDRE MYDEKLDCPC SPKSWNISDD LGQIEYIFSD 600
  601 KTGTLTQNIM SFKKCSINGI RYGKSHNEDT CIKKRRNLNY NENLSCKVDL DKKKMLETLS 660
  661 LSDSPNPESI TFISSKFVDH LQSNENYIQT EACFEFFKAL ALCHSVVTDV QDETLIYNAQ 720
  721 SPDEEALVKV ARDFGFTLLN TKNRRYTIRI RGENKNFRVL DIIPFTSTRK RMSVIIRDED 780
  781 GIIHLICKGA DTVIFPRLSS GQNNIIEKTK KHLASFSSEG FRTLCIARRT IDKQDYLEWK 840
  841 VNFNEANSAI HERNEKVSKV SEMIEQELEL LGGTAIEDKL QENVPETIAL LAIAGIKLWV 900
  901 LTGDKVETAI NIGYSCNLLD PNMTIFRIDA NSFGALEEVE AFIRNTLCFN FGYMGTDEEF 960
  961 RFLLKDHSPP SPKHAIVIDG DALNFVLSEQ VSFLFLMLCK QCKTVLCCRV SPSQKAAVVA1020
 1021 LVKKSLNVVT LAIGDGANDV SMIQEADVGV GIKGVEGQAA SMSADYAIGQ FSFLGRLLLV1080
 1081 HGRWDYKRMS QMISFFFYKN VIWTFILFWY QFYNEFDGNY IFDYTYVMLF NLLFTSLPVI1140
 1141 IAGCFDQDVD ASVSMKNPSL YQRGILGLEW NGKRFWSYML DGIYQSLVCF GVALFVFKFG1200
 1201 DFVSWTGRNI ECIEDIGLFI SSPTIFVINI FILMNQERLN LISLITWMFS IGVFWIWTFI1260
 1261 YSEVGPSYAF HKSASRTCQT FGFWCVTVLT IALCLLPRFS YICLQKLFYP RDIDLLRRRL1320
 1321 CAKSDDETSS SSSFATDIEM CEQCNDPLSS KKNSGIVTSV SFDDSNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle