YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC19B12.06c
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIELGERIS TSVGFLAELF LMKIPLFTVI VALLTIILGI VNIFLPIVDF FGLSWHNLIN  60
   61 IRLHTLNTYP LVHHGVISFI LGLLGIFLLM PRFERRYGTL CTIAMFFGFL EVIPAIAYLI 120
  121 ACYVAESDDV YVGIGGWVYS LLAMYLLNLF GDLHPKLLNL PQVVRMALAL VAPVLGLPLD 180
  181 FSITIVLHLT AVVISIIFSF AYMDFFLPRG GFLVWVETKF SKIIDAIPNY ISVTEAAYYQ 240
  241 ADGAIPIQDL GSNSSGIV

Type	Start	End	Confidence
Cytoplasmic	1	23	0.92
Transmembrane Helix	24	48	0.88
Non-Cytoplasmic	49	70	0.91
Transmembrane Helix	71	90	0.96
Cytoplasmic	91	99	0.81
Transmembrane Helix	100	122	0.92
Non-Cytoplasmic	123	129	0.87
Transmembrane Helix	130	151	0.89
Cytoplasmic	152	160	0.80
Transmembrane Helix	161	179	0.86
Non-Cytoplasmic	180	184	0.62
Transmembrane Helix	185	206	0.87
Cytoplasmic	207	258	0.89