YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	grx3
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRKIFLIT SLIISLLLIH IFIFSPLNEP EKNAKAGPLG LSDVSVPSAP KLPAKDSTDF  60
   61 EVFLENPVII FSRPGCPYSA AAKKLLTETL RLDPPAVVVE VTDYEHTQEL RDWLSSISDI 120
  121 STMPNIFVGG HSIGGSDSVR ALYQEEKLQS TLDEWTHNKV LILPTD

Type	Start	End	Confidence
Cytoplasmic	1	5	0.73
Transmembrane Helix	6	24	0.79
Non-Cytoplasmic	25	166	0.91