YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MUG89_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEALNENVS DTASNGPVAK TRAPPNTSFR QQRIKSWQPL LTPKIVLPLF FVLGIIFGPL  60
   61 GGGLLYASSI VQELVVDYTD CETLASYDEF SAVPSKKYTA SFDQSGTIGF DKESTYWKLE 120
  121 KILDKDLDMD VNYCIIRFTV PSVLKAPIFI YYRLTNFFQN HRRYAKSVDE KQLQGVALTA 180
  181 DEVKGGNCFP LEVNEDDKPY YPCGLIANSL FNDTFSSLRL LDDNSVYTFS TKNIAWASDK 240
  241 RRFLKTNYSP DDVAPPPNWV LRYPDGYTES NMPDLSTMEN LQVWMRTAGL PTFSKLAMRN 300
  301 DNDDIFPGTY EIKIGLFFPV KSFDGTKSLV LTTRSVLGGK NPFLGIAYIV VSAVCVVLGT 360
  361 VFTLRHFIRP RKLADHRYLN WDSEENNLAP HLSDRP

Type	Start	End	Confidence
Cytoplasmic	1	44	0.94
Transmembrane Helix	45	66	0.91
Non-Cytoplasmic	67	343	0.98
Transmembrane Helix	344	364	0.95
Cytoplasmic	365	396	0.93