YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC83.13
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIEKKQAS ASNLLLGAGL NLFETSSLGQ PLEVTKVQMA ANRTQTMAQA IKAIMSRGGI  60
   61 LGFYQGLIPW AWIEASTKGA VLLFTSAELE YWGRRLGLGA TSAGAIAGMG GGVAQAYATM 120
  121 GFCTCMKTAE VTRAKQAATG QEVKGTFRVF ADLYKEKGIR GINRGVNAVA LRQMTNWGSR 180
  181 LALSRFLEKP IRYFTGRTEA EPLTTGQRFV ASVSAGALSC WNQPLEVARV EMQSLTKGIQ 240
  241 HSSPGIMQTI MSIYKNNGIK GLYRGAVPRM GLGAYQTFVM VFLADCVRGY LAK

Type	Start	End	Confidence
Cytoplasmic	1	52	0.52
Transmembrane Helix	53	73	0.46
Non-Cytoplasmic	74	293	0.53