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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GEM1_SCHPO
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEVRVVICG DQGVGKSSLI SALIQEDNVT SIPKVFPIIS IPSNPDSNDD VSLVLVDTQS  60
   61 DSNEREYLAA EIKKANVICL VYSDNYSYER VSIFWLPYFR SLGVNVPIVL CENKSEDLDN 120
  121 YQGLHTIEHE MIPLINEFKE IEACILCSAL EKINVNELFY MCRACVIYPI TPLWDAKERT 180
  181 MRKATIHALS RIFFLIDKNN DDLLSVDELN SLSEKCFSKN LSIEDASEIL SKVKEICPEG 240
  241 VYEGQLTLPG FLAYNRVQVE NGKQESTWGI LRAFHYTDSL SLDDSYLSPK FEVAPGQIVE 300
  301 LSPKGYRFLV DLFYQFDRDN DGALNNEELS ALFRHTPGLP EIWVSSQFPN STVLNEHGYV 360
  361 TYNGWLAQWS MITLFDYKTT LAYLAYLGFD TDGRGHNTDA LKVMRKRVSQ NRKVSKYDRN 420
  421 VFLCFVVGSK SCGKTALLSS FINNNTNRLT PNTVVNSVEF QSTQRYLVLS EIGETDLDIL 480
  481 AEPKSLEACD ILCLLYDSSN PNSFSFIANL LNLYPDLQKI PCVFAATKAD LDRQQQRYPV 540
  541 QPDEFTKQLG LPSPTHISTA AIWNTSKEFF IQLAESAQYP ASSIIRIPEE DSNKTNYQLV 600
  601 AALTAFGALL LSVGGSLTWK IIKHQYYSKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle