YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC23G7.06c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFAFLITYL LGGVTFLPFI LFIYLLTRPT HKSEELRIIE PNNDCLTKLD KDIRIQGWIR  60
   61 VTTKFLQGKS GSVKVQEIPQ DQLPKSSSDN AVTDRKTISP SGINNQYVIR NPKDVYYATV 120
  121 QAGKLHLFDP VKTSELLHVI NLHEILYQKL VKQGLICLWT YSFKQRRLDY ALLSYSKISP 180
  181 AIKPLEAPID FDYASVHHNL TALSSPDTDW LNAFIGRIFL GIHKTEGFKS LVVEKLTKKL 240
  241 SRIKTPGIMT DVKVIDVDVG EAIPTVNGLK FESLSNGGEL IVSADIWYEG DCSFKAETTA 300
  301 NIKFGSHFPS KTVPLALVIR LTHVSGKVRL LIKPPPSNRV WYAFYEKPRL HLIVEPMVAR 360
  361 KQLTNNYLIN FITQKLVELV HETIVMPNMN DLAFFIDNEA PIKGGLWDIE LFRAPTIQKP 420
  421 AEKDAKAERK KSGLSSSTSE ESLNRHISKR SSNSNDTAPS SHIIADKNLE PTSNIQLKKN 480
  481 PDGNLVETSE LSDSDENSVL SNKSSTLSKK VVENTSPLKY THSASKSFIG EVQDSLQALK 540
  541 TKAHKPRSIG GDSSQTTLSE TTKKYGSVAK KSFFQGVSDA KSFVKKIKST YIDDSSSNSP 600
  601 SDIESNYSAD DNEISKSKAQ NAIDFNVTNT HSPSRSISSE KSYKAAERGQ QDKHNDVLVD 660
  661 LNPNVEAEKS NPHSNSQKTS KNDMSRNQRN KYAKEIMTGQ PTLHPQGQLP IQNVEQRATH 720
  721 KPLPRPPVQV ETREPVRPVP PIPKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle