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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC977.17
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVPLRFSTP SSSPSASDNE SVHDDGPTTE LDTFNTTDVP RRVNTTKARQ MRPKNTLKVA  60
   61 FSSPNLKGLD NTADSDSQPW LGGYLAGRLE DISGQSRRNY VDPYYEELNA GRRPNKPVWS 120
  121 LNGPLPHVLG NSVVEKISQK NQEARSRANS RVNSRANSRA NSSVSLAGMD GSPNWKRKMK 180
  181 SAVFGSRVKL NDEEAQLPRN KSSVSIAEQA ASRPKVSFSL QSSRQPSIAE EQPQTQRKSS 240
  241 AITVEHAENA EPETPRNNVS FSRKPSIAEQ DSSQDITMPP NEIIAEESLD SGSDTETLYL 300
  301 NYWCKIRHFF REGFAEFLGT LVLVVFGVGS NLQATVTNGA GGSFESLSFA WGFGCMLGVY 360
  361 IAGGISGGHV NPAVTISLAI FRKFPWYKVP IYIFFQIWGA FFGGALAYGY HWSSITEFEG 420
  421 GKDIRTPATG GCLYTNPKPY VTWRNAFFDE FIGTAVLVGC LFAILDDTNS PPTQGMTAFI 480
  481 VGLLIAAIGM ALGYQTSFTL NPARDLGPRM FAWWIGYGPH SFHLYHWWWT WGAWGGTIGG 540
  541 GIAGGLIYDL VIFTGPESPL NYPDNGFIDK KVHQITAKFE KEEEVENLEK TDSPIENN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle