YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC9E9.04
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIYYMIVFM LLMVEIVSFV ILSLPLPLKV RRAILNAISN SPFAGRVKHV LKITIICILI  60
   61 LFADSVRRVV RVTKEYDLAI AAPSTTESAR SGYKASQFYA QRNLYLCGSA LFLSLVVNRY 120
  121 YLALEAMIAA QDKMQALQTQ VEASTNNAKA VEELETLRTK LETRDKEYET LAEKYAAVTK 180
  181 TVEKKKDI

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.70
Transmembrane Helix	7	28	0.93
Cytoplasmic	29	48	0.75
Transmembrane Helix	49	66	0.64
Non-Cytoplasmic	67	103	0.59
Transmembrane Helix	104	122	0.42
Cytoplasmic	123	188	0.59