YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC13F5.03c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGPRLCAAT PRFPLVSLAH RNSKVFALAS SNAVAQRWGK RFYAPIETET PHKVGVEFEE  60
   61 SKDRIFTSPQ KYVQGRHAFT RSYMYVKKWA TKSAVVLADQ NVWNICANKI VDSLSQNGMT 120
  121 VTKLVFGGEA SLVELDKLRK QCPDDTQVII GVGGGKTMDS AKYIAHSMNL PSIICPTTAS 180
  181 SDAATSSLSV IYTPDGQFQK YSFYPLNPNL IFIDTDVIVR APVRFLISGI GDALSTWVET 240
  241 ESVIRSNSTS FAGGVASIAG RYIARACKDT LEKYALSAIL SNTRGVCTEA FENVVEANTL 300
  301 MSGLGFENGG LAAAHAIHNG MTAIHGPVHR LMHGEKVAYG TLVQVVLEDW PLEDFNNLAS 360
  361 FMAKCHLPIT LEELGIPNVT DEELLMVGRA TLRPDESIHN MSKKFNPSQI ADAIKAVDSY 420
  421 SQKWQEQTGW TERFRLPPSR HSPHLTDIHP

Type	Start	End	Confidence
Signal Peptide	1	19	0.61
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	450	0.98