YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mug86
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNPSRSNS RSKNGDLESG LKFVDNDHDS KDIEARNRNH FYGFRAEPIY DQTERLANQV  60
   61 AELQEQQKRL FGPSGADFEP NIHRLRYINY GNPAPFGLSA FAFTTFLLSL FNVNAGHVKV 120
  121 SNMVTAPAAF YGGLAQLLAS MWEMASGNTF GGAVFGSYGC FWLSYASIFI PWFNIQNSYD 180
  181 DPNDFNYAIG LYLICWFIFT FLVLLCTVRS TLAFFSLFMS LDVCFLLLAC AFLRTSDGSP 240
  241 NVVLIRVGGA FGIFSACAAW YNAMAGLATI ENSFFTVPRA IFPWSLEGLG PEEANRRRMM 300
  301 ADDK

Type	Start	End	Confidence
Cytoplasmic	1	89	0.94
Transmembrane Helix	90	111	0.86
Non-Cytoplasmic	112	122	0.63
Transmembrane Helix	123	142	0.83
Cytoplasmic	143	149	0.70
Transmembrane Helix	150	173	0.85
Non-Cytoplasmic	174	186	0.84
Transmembrane Helix	187	206	0.94
Cytoplasmic	207	213	0.68
Transmembrane Helix	214	235	0.91
Non-Cytoplasmic	236	241	0.84
Transmembrane Helix	242	264	0.86
Cytoplasmic	265	304	0.85