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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC1039.11c
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIHRMKSNL ASLFLSFFLL LACEFTFSYA DFSTTTSDAT HPSATATEDI FSTPAVPSLG  60
   61 LAQNPSVYEP YRGDKCGGYN AIQVSEYEKG VLAILQLNGD PCYAYGTDYP FLALNVSFDS 120
  121 IDRLHVSIQD LYGAQFQFSK RTDVWDAPLY HFQPQFGDRT YNFSFNSQPF EFWVTRVSDG 180
  181 EVLFDTRGHK LIFEDQYIEL TTNMVDDYNV YGLAETVHGL RLGNNLTRTF WANGNPTPLD 240
  241 RNAYGTHPFY LEHRYTPSEN LNSDGQPSYT SSTHGVLMLT ANGMEVLLRP NYLQYRIIGG 300
  301 IVDLYIYVGG TKNPKDTVSQ FVQSVGTPAM QQHWTFGFHI CRWGYKNVFD LVEVKENFKN 360
  361 FEIPVDTFWS DIDYMYEYRD FTVESNAFPK DKMMEFFNSL QQSNQHYVPI IDAAIYAANP 420
  421 INRSDDVYYP YYEGVRRDIF LRNPDRSLYV GNVWPGFTTF PDFTNPETTN YWTECLMNLS 480
  481 AAFGYNSSFP LPYSGLWIDM NEPTSFCIGS CGTDKLDQNP VHPAFILEGE PNNMVYMYPE 540
  541 GFEHTNASEH ASAYQASVSQ YYATATSTVE SVKATSTPLN VRPKYNINYP PYALNTEQGE 600
  601 GDLSNLGVSV NATYHDGTVR YNLFNTYGYD QSRVTYDSLT SIEPNVRPFI LSRSTFVGSG 660
  661 KYAAHWLGDN YSLWSNMIFS IPGALTFNMV GLPMVGADVC GFMGNTDEEL CSRWMALGAF 720
  721 LPFYRNHNSL GSISQEPYRW ESVAESSRCA MNIRYSLLPY WYTLMYEASS QGLPLIRPLF 780
  781 FEFPNEPSLA NADRQFMVGS ALLVTPVLEP NVDYVRGVFP GDNSTIWYDW YDHKVIYRQH 840
  841 NENITLSAPL THINVAIRGG NIIPMQKPSL TTHETKQNPY DLLVALDSDR KACGSLYVDD 900
  901 GVSIQQESTL FVKFVANGDS LSIESYGDLQ VHEPLSKITI IGLPCAPIGV YFEGVQVESF 960
  961 SYLEDTKELV LTNLEAFTST GAFSNNWTIS WNLPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle