YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	qcr6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFWKNLFTS AFTPISAEAD ELIKEDRKQF EENTPSKKNF ETQSPDEPSP KTTDSTGARD  60
   61 ANLSLKTQEP IVSADDAKGA QGKGADEKEE KKETIQPPEE VKTEPPQPEE KEGKEAKEPE 120
  121 EPPKEEAEEP QEGGEEEEEE EEEEEITDPL EKMTQECMDA PDCKEVKHHF EECTARVTKK 180
  181 VEQGDKSEDC IEEFFHLYHC ARDCADPKVF KVLV

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	214	0.99