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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC13G1.05
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSNTSPGQA DPLESENESS LTSRFLPNKR DGGKDNESVI PEKEEPDLNE PVLAVPLPKS  60
   61 RYALTKRSSS SEYPRRSAST SAKKNVIPIT RSYSTTFFSK TNDQPTVTGN QDKPISRLRA 120
  121 SKLQIQNFWN YICFELLAND TVPANPIKEK HVENFLATPY AIEKTFLFGW FVSVDSFLYI 180
  181 FTLFPIRVLI SFFTLSRCIF QGLFSTFFHR NSSPNRSLPR SRKIDLLKLL LIFSTSILIR 240
  241 KIDVSRLYHI IRAQASIRFY VLYNVLEIAD RLCCALGQDV LDCLFSNHIL SFNFWNPAGW 300
  301 MTFFYYFAIS LAYMVLHTLV LLYQIITLNV TVNSYSNAVL ALLMSNQLVE IKGAVFKKFE 360
  361 KENLFQLTCS DVVERFQITI MVIIIFLRNL AELYTTSSLD QPLLTFKRLK TLLAPFFWVI 420
  421 GSELFVDWLK HAFIIKFNYI KPSIYSRFTD VLCHDYVASG AQLTQTVTGC SQQVARRMGL 480
  481 PVLPLVCVFI RTSMQTWSMF RSTHSMKQEI AKSIGTIFPT KDNYVYYLPN KEANTYNAGK 540
  541 EASWETLLLS VVRGKSGIAF LFFMAIMLKL LLGKAILAIT QSRYESMQQR EEKINSWERE 600
  601 RKANNFFRGH IEIDKKTKDF LNNSKDDLPV PKSPLLTLER YAMHSKRIW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle