YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NPC2_SCHPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTTFIYAI TCLPIFISAS SWFSSFSFGE SKSTDLVSST SEKIPGANPA SYCADWDRGD  60
   61 DHVVVDYINL IPNPPAAGKN LTIETEINVG TTVLNGSYVD IQVKYGFVRI VNERLDICDK 120
  121 AYELAAVECP VEPGIITKQA TISLPWAIPP GRYHVLATAY NADGEQLTCV SASVSFSHFG 180
  181 FQLINQDH

Type	Start	End	Confidence
Signal Peptide	1	27	0.62
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	188	0.96