YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mrs2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLIVGFNLR TSIASFSPIC RSLFLFPKYR SRIIRPVVLL EKPFDKHFYA TDSNPLITGF  60
   61 PETSKNCPPS VAATKNRLLM NCTEFDDHGN VRVISGDFKK MDLCKQNGLL PRDLRKLNTS 120
  121 INSIVPVILV REGSILINLL HIRALIKANS VLLFDVYGSQ HSHSQSQFIY ELEGRLKQKS 180
  181 SDFGWLPYEM RALETILVSV VNTLDSELHV LHNLVSDLLA DFELDINQER LRTLLIFSKR 240
  241 LSGFLKKATL IRDVLDELLE QDQDLAGMYL TERLKTGKPR DLDKHDEVEL LLETYCKQVD 300
  301 EIVQQTDNLV GNIRSTEEIC NIMLDANRNS LMLLGLKLSA MTLGLGFGAV VASLYGMNLQ 360
  361 NGLENHPYAF YITTGSIFAF AAFLSSLGIL KIRRLKRIQM ALYHRCNLPI SLDPRSLRPP 420
  421 YL

Type	Start	End	Confidence
Cytoplasmic	1	332	0.96
Transmembrane Helix	333	356	0.87
Non-Cytoplasmic	357	367	0.90
Transmembrane Helix	368	390	0.93
Cytoplasmic	391	422	0.97