YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RAX2_SCHPO
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIYSSFWIR LYFTFRFFCY FLTSVVASDV SFLGDFSGFN VLSNSSANTD LSSQFFEQTN  60
   61 NGSLSSLIDT SYSNSQICYS SWQGDLYVIV LDSEQQTVLL QSNFTSNPTS LEIFSSQNTS 120
  121 FFGNISAIFC DDKFPYAYAT FTFSDKPSFT SIYRWNVTNS NVTIEHFYNV KGNVDSLFFL 180
  181 NNDSVAISGN FTEISPFSSS NGPQIAKLAF RSNNSFSQNS LNRNLSSVSC DLTDSYSLWD 240
  241 PSSSGLVSIY AWAPYLIDFN RIRFYNYESS ENSVAFFSAI NPADGTVLPL THYDLETGLS 300
  301 STCDVNCSLQ NFANYQDFYF SKGYNSYQIE IQMFGNGEAT ENSAFGLSSL QFFETNQNSY 360
  361 FDDSYNQESC GFPGLNSLSS YEGNFEASFS NASMPYWIQT IAGEQASVSF FPNITVPTNG 420
  421 TVQLLIPGCT YDNTCSQRGS VIANVYFAKN KQPATKLVQQ ASDFDQYVSL YSGYLQGFSD 480
  481 NFRPYVELLP YKNSRMVTHS IRFLEQSYTN VSNGLVFVNT TTDVNKLPSI IEFPAASKLR 540
  541 GTAISQIKSL SNGNFSLYMT GNFSDNYGNN VVYMDSLNHL HSFPNNGLNG WVSYIYVSGD 600
  601 SSYFGGNFTH TGDGSIKLNY IAMYSETSRN WSSLGLGTNG PVTHIGSTSL FIDGKIESFI 660
  661 SFQGDFNEVY TSEGYAISTS GFSLWNPSSK SWVSMEKLGF YMSGYLFDIP GFNSTQRIYS 720
  721 GNLSAIASYS TRNIAHFSSD SLNDTFIPCY VNAFPSYIRL EDIAYPFANN SMIAILGSEE 780
  781 MEDKCTAAVY FANSTEPIYP KRILSANCSS KFIVLEDCLI IYSNDTDESD IVKNTFVSFN 840
  841 TTSNSLGNTT ALSQLKGHIN SVIVDDSYNN IFFGGNLSEQ SSGCVGFCIF EYNSSSWRNI 900
  901 SHNLISAEVQ SILWVNETYS SMYLAGKFVW DTSDVDYLLM YNFDNNTIMS CKGSSSIPGP 960
  961 VLLASLKSQS KDEYSVLLYG TEVSSSDTYL NVLNSEGAIN SYSLDIHLNQ STINSIDFFE1020
 1021 SNQISQIPIN DSIIVLSGLI VLDDSSKASA VYCVNKSCLP LLTAFKDNGE AGIVRKVVQQ1080
 1081 KSFSSSASKM IPVTTKYDHI GQPRYVVIIS LGISIGVMFL IMSGSIVVEI IHWFFSEHVE1140
 1141 TLHDYSNFLK ELKTQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle