YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC1105.13c
Protein type:	Transmembrane
Type Confidence:	0.53
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITEFIKSFL LFFFLPFFLS MPMIFATLGE FTDDQTHHYS TLPSCDLLLI RGEVKENARC  60
   61 FLHNPKISHQ HHSFWSLIEG CLEALQFGLL AILQGLFSQF AWEACSCTFA CMLLTSERTE 120
  121 PSYPFSEITE VSRGGLHFVK LN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.48
Transmembrane Helix	9	27	0.52
Non-Cytoplasmic	28	142	0.76