YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC6F12.04
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKTKMFSAI NLGVGGIFVL SGFIKLFSFS FVNALLALFI IVFGLGTIGL EKEIPPIAIK  60
   61 YGSFMFSFLG RGFFYAFMGT LLFSYSGFTS FLGFLVLLAG IAYCGANYVA GLQDYAPRSM 120
  121 RDNDWDDNVD EV

Type	Start	End	Confidence
Cytoplasmic	1	6	0.92
Transmembrane Helix	7	27	0.87
Non-Cytoplasmic	28	30	0.74
Transmembrane Helix	31	50	0.91
Cytoplasmic	51	60	0.79
Transmembrane Helix	61	83	0.84
Non-Cytoplasmic	84	90	0.68
Transmembrane Helix	91	111	0.94
Cytoplasmic	112	132	0.95