YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC977.06
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRDTRNVDL ERGLELCKPE KVNKQNLFTN IIKPQKDKIN IKTDKIKFFL NNLFTEFSKF  60
   61 HDSCYPDGRI STRSKLRWPL LIIWCILIVF AIDKNFEVKD FLSIWINESF INENRFYSEI 120
  121 WGPIAIYICL FVLLLLGLIY CSKIVVKAIP LISIVIAAVV VIIAVAMVKI LYICHWLLQN 180
  181 FNFGFRHKS

Type	Start	End	Confidence
Cytoplasmic	1	77	0.98
Transmembrane Helix	78	96	0.91
Non-Cytoplasmic	97	119	0.95
Transmembrane Helix	120	141	0.91
Cytoplasmic	142	150	0.78
Transmembrane Helix	151	173	0.93
Non-Cytoplasmic	174	189	0.92