YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC336.13c
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPFVRNQS FKSVFFKNLV GITLWVPVLM FVEQHVVSVG TIEGRSMKPA FNPETNMLQR  60
   61 DRVLLWKWNK DYKRGDVVIL RSPENPEELL VKRVLGVEYD IMKTRPPKKL SLVPVPEGHV 120
  121 WVEGDEQFHS IDSNKFGPVS TGLITAKVIA ILFPFSRAGR IDHEGFRKNA VFLSGKRSVK 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	13	0.58
Transmembrane Helix	14	32	0.60
Non-Cytoplasmic	33	180	0.86