YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GET1_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDLIISTIL LSLFIHFFDK FAKKRTIDGA YRIYVSVSNN KDLKKNKEIL EQLLTVKKEL  60
   61 NATSSQDQFA KWARLNRKYE QLSQEWEKQS ANVKIFQDTF KRVLSLFLWI LTRGFRFYIQ 120
  121 FKESKTPVFF LPAFLLPSWA LWVLSLPRSI YGSVSLTVWN FAVQKTISGI F

Type	Start	End	Confidence
Cytoplasmic	1	125	0.73
Transmembrane Helix	126	146	0.75
Non-Cytoplasmic	147	171	0.55