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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gpi16
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNGCLLLF AYSLLSFSLT AATIDETYDE SLFIKSFSSR YSYVSFAFEI GASTDSTHSS  60
   61 VFSESSFSLF PLSIARVMDE CQVSELHIRA TRGRWDYENW KESPDNGFYS GGLGFEVWAF 120
  121 MANDPSMKYW LKLTNQLSGL LCASLNYIDS SNTYQPQLSY PGSFSFSNNT QYFASLPQED 180
  181 VCTENLSPLF KLLPCKRKAG IASLLDSHLF FDTDWHSFSI DVYPSENQSL ASVKMGIIIQ 240
  241 AVVDVERNGR RKGKTTFQPP SEYCHDEDMD SLHCLMSGYS TEHHTVDDLF HKVPKERCLL 300
  301 SSTFSDVFVS NGDKIDTFSL DEAANIQIPI QSTSDNHTVT VDRSLSNDGN HWGSLSSTIY 360
  361 NPSSSPRTIV YFEKFPWFVR VYLHTLTITL NGTRINTKDF IEKLYYQPLR DRKAGTMMEI 420
  421 QFSIPPHTNL IVHFNVEKTP LRLDEYPPDA NRGYNLPPAI ISVFDENNTK LCSLRTAALL 480
  481 MFIPTPDFSM PYNVIIFTST VIALTFGGIF NLLTRRFVPQ QSKFQNRQPS MLQRLKEKIF 540
  541 HKKRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle