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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC3B8.10c
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSIARLSDE INKAILATPL DDDEADKEKL ANARGRASSA TLRHYNRRRS SYSASSLSSL  60
   61 SSKPTEKEVP TRNEKPKHAN IMRVVVYWIR VFLKRIYTFF VHSARVFLYH FLNEEKEFTL 120
  121 ASFFWGLCRF VFFPVLLSYK RREMLPPQPS VRRPRFYSSY SYPSSHQDPA YSSFKRHRSS 180
  181 NSYSSSSNGN HVRFQPSIAE EEISFNSFSN SLNSEEDVCV SPMKPKEVSL MGKANSNRSG 240
  241 HSHQPQSTQF SPPANDNISK LPSSFTIVND PLKSPSSSRL RIRNITLCAD KIPRPLLNSK 300
  301 LPRKTLVLDL DETLIHSVSR GSRTTSGQPI EVHVPGEHPI LYYIHKRPHL DYFLSNVSQW 360
  361 FRLILFTASV QPYADPIIDY LERDKKIFAK RYYRQHCALV DSSFVKDISI CNIHLSRIMI 420
  421 IDNSPASYNA HKENAIPIEG WISDPSDVDL LNLLSFLHAL QYVHDVRDLL GLRLAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle