YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19114804
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIASSLRLF GKAPASYLFN GFRRQMKNPL MKKGVVYAGV SGTCAAAGYM FGNFVMEKHI  60
   61 YQVKYTEEQE KEVLEVENRL QNLKIVKDLR QNPSFRELRM PFNRSNHSLT NNLLSGPGRI 120
  121 TVPPVIFYDK STRQVYAIAH VGKDVGLDDD TIHPGLIATC MDEVLAICSF LSLPNKIAVT 180
  181 ANLKLSNPTK AYTNHFYILR SHLEWTKGRK AQTHGTAYML DNEDPSKSTC VAIADGLFGM 240
  241 LSSFP

Type	Start	End	Confidence
Cytoplasmic	1	33	0.66
Transmembrane Helix	34	52	0.70
Non-Cytoplasmic	53	245	0.95