YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SDH3_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFATRSFCLS SSLFRPAAQL LRPAGRSTLR NVWRRSIATE HLTQTEANSR LASQRVHRPN  60
   61 SPHLTIYEPQ LTWYLSSLHR ITGCVVAGTL YAFAMGYLVA PLAGYSLDTA TISGLIQQVP 120
  121 TWIKVPAKFV ISYPLTFHIF NGIRHLIWDT TKELSLKGVY RTGYAVLALS VLTSGYFAMI 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	80	0.87
Transmembrane Helix	81	103	0.80
Non-Cytoplasmic	104	128	0.80
Transmembrane Helix	129	148	0.76
Cytoplasmic	149	157	0.87
Transmembrane Helix	158	179	0.83
Non-Cytoplasmic	180	180	0.93