YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC4D7.06c
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKYQSVQP GGSLIIAWRA QGKKVLIVGG GVVAAGRILH VLNADAHVIV VSPKAGLCKE  60
   61 VAWRIQEKQV EWRDRGFLVE DLSDDVNMVL TAIDDPSLSS EIYKLCKSKK IPVNAADIPP 120
  121 ECDFYFGSEI RNGPLQIMVS TNGKGPKLAS LIRKKIESSI NPATGMALEK TGLLRQKLRD 180
  181 IVPEPENSRK RMRWMIEICE LWSLEELAML DENLINRLLG YFPKKTPSYR EITTPAYSKI 240
  241 DNYIWFGAII ISGAVLLKHV SKAR

Type	Start	End	Confidence
Non-Cytoplasmic	1	242	0.86
Transmembrane Helix	243	261	0.59
Cytoplasmic	262	264	0.51