YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC1703.13c
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPLIPPAP PKKTLQLYTP QYYGLCTLGG LLACGTTHSA ITPLDLIKCR KQVNPNIYPG  60
   61 NIAGFKTILS KEGLRGLYTG GMPTLIGYSL QGCGKYGFYE LFKHKYSTLV GAQKAHEYRT 120
  121 SIYLAASASA ELLADIMLCP MEAIKVRVQT SNPRFANTTR EAWSKIVTNE GFGTLYRGLA 180
  181 PLWFRQIPYT MMKFASFERI VEALYTYIGK PKNMYSKAEK IGISFAGGYM AGVLCAIISH 240
  241 PADVMVSKLN SNKKAGEGAG AAAARIYKEI GFSGLWNGLG VRIVMIGTLT GAQWLIYDSF 300
  301 KIMCGFPATG A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle