YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC31G5.02
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.63
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLLYQIGLF TCLWLTQYVG AEIDNYDENL VGTWSSKSET VLTGPDFFDP LDEDFFEPEL  60
   61 PGISYSFTDD GFFEEAIYII KSNATKPQCP KGFLQWQHGT YAINDTGTLV LTPFVGDGRQ 120
  121 LESDPCTSNF SVYTRYDQVE TMEKYEISMD RYHGRYKLEL YEWDGTPKQP MFLAYRPPKM 180
  181 LPTSTIAVNT IQTAAKRWTA PLVPLAQKHT NTIWWVGLGL IAIGSIGYLV VS

Type	Start	End	Confidence
Signal Peptide	1	21	0.72
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	211	0.80
Transmembrane Helix	212	231	0.86
Cytoplasmic	232	232	0.68