YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPCC63.13
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKDYYAILN ITPKASAEEI KYAYKKAALE THPDRVSPSA RARATEQFQL VNEAYYVLSD  60
   61 NSRRAQYDRE SASSSAKPRQ SFFSRTNPQP QSQSQQGGPS FGFRQSFSDS QFEQVFNEMM 120
  121 NETSTRGIAN AFWTIVGTLA GAALGFITFD VPGVLVGSAA GAKLGRIRDT HGKSAYSVFQ 180
  181 DMPAVEKARI LTQFLSHLLN SSKQFTSS

Type	Start	End	Confidence
Cytoplasmic	1	128	0.80
Transmembrane Helix	129	149	0.82
Non-Cytoplasmic	150	208	0.86