YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MUG84_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKVPTYEYY GFVMYLVSML GFGVYIVWAL TPAPVLKFFE IHYYLSRWWA LAIPTWLFVL  60
   61 VIYIHVVLNA YNTEVLTKPF SSLECIVDQY ALVGEEDGAA HGRVVDLRLC DVNKQQLEET 120
  121

Type	Start	End	Confidence
Cytoplasmic	1	8	0.77
Transmembrane Helix	9	31	0.88
Non-Cytoplasmic	32	47	0.72
Transmembrane Helix	48	68	0.92
Cytoplasmic	69	120	0.77