YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAPB2C8.01
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSRLLILI CLYSFVTFAY PKVTQDYRNH LPIKFAKRSE VTPNTSLAQC PKYVTVYSSG  60
   61 SSHYISTIYP VNKTHHTEYT TLTDGSIDTY TITAKTDTGT DVVVVETSAN TITTTLYSGS 120
  121 LEFTTTLDSA NGTTPATIEV VEPAAGTVTT TIYSGTTPFN TTLASATDTV PGTVEVVEPE 180
  181 AGTVTTTVYS GTQEYTTTLA TASGTVSGTV EVVDTAAGTV TTTIYSGTTP FNTTLASATD 240
  241 TVPGTVEVVE PEAGTVTTTV YSGTQEYTTT LATASGTVSG TVEVVDTAAG TVTTTIYSGT 300
  301 TPFNTTLASA TDTVPGTVEV VEPEAGTVTT TVYSGTQEYT TTLATASGTV SGTVEVVDTA 360
  361 AGTVTTTIYS GTTPFNTTLA SATDTVPGTV EVVEPEAGTV TTTVYSGTQE YTTTLATASG 420
  421 TVSGTVEVVD TAAGTVTTTI YSGTTPFNTT LASATDTVPG TVEVVEPEAG TVTTTVYSGT 480
  481 QEYTTTLATA SGTVSGTVEV VDTAAGTVTT TIYSGTTPFN TTLASATDTV PGTVEVVEPE 540
  541 AGTVTTTVYS GTQEYTTTLA TASGTVSGTV EVVDTAAGTV TTTIYSGTTP FNTTLASATD 600
  601 TVPGTVEVVE PEAGTVTTTV YSGTQEYTTT LATASGTVSG TVEVIEPAAG TVTTTVYSGT 660
  661 QEYTTTLATA SGTVSGTVEV IEPAAGTVTS TVYSGTQEYT TTLATASGTV SGTVEVIEPA 720
  721 AGTVTTTVYS GTQEYTTTLA TASGTVSGTV EVIEPAAGTV TTTVYSGSEV YTTTLASASE 780
  781 SVPGTVEVVD PEAGSVTTTI YSGSVEYTTV LADASGSVTG TVEVVEPAAG TVTTTVYSGS 840
  841 EVYTTTLASA SESVPGTVEV VDPEAGSVTT TIYSGSVEYT TVLADASGSV TGTVEVVEPA 900
  901 AGTVTGTLTS GSQFFTTTIA QASGSVSGNV EVIEPSGSTV TSTIYSGSES FTTTLAVGSG 960
  961 TIPGTVEVIL PAPTTIYTGT VATTITYSSS STPVSTVVVI PTAVCSGVRG LQYAVYNYDI1020
 1021 SASKSKFCVS SGNTDVAAFT QPAYFGSSSL DQSSPLFTGV LSSTAALPEW TSSYYLPDYP1080
 1081 PDATAMESTR CNCKAIVYQF FFRVPYTDTY ELNVYNVDDV FYGWFGDKAI SGWSNTNYDA1140
 1141 YAYWHVTTGQ TGMGSFSMGT LTQGSFLPIR LIVANGGGKG GFNFDFSSST DTYAATSYAY1200
 1201 TATCTQSFLP FGLGNGGIDN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle