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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: apl1
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSSHFSS TAADLLAVFS SDNKDKSANK RISALKKAIA GISYGYDMSS LFPSVISSME  60
   61 SNNLELKKLC YLYLKIYASV KPTEAKRAVK LILNDIYSSN PMIRSLALRT LTSVNIKNFW 120
  121 VAAMDPIVRL LDDTDPYVRK TAAIGIAKLY SYDKKMVESS GLIDHLKEML SDESSVVVAN 180
  181 SLAALMNIVN SSTGFKLTFS REISNKLVKS LTDCSEWLQV AILDALIFYV PQKPGEAESF 240
  241 AERISPWLQH GNAAVCMGAV KVILYLTNYM KDDNRVKEYF MKTQPPLVTL LARKSSATQY 300
  301 VILRNIQIIL EQCPEMFAND IHFFYCNFDD PIYVKLEKLD ILTKIADIHN LDQILPEFVE 360
  361 YASEIDVELV RKSVKCIGYL AIKIEERKND CIDSLIELMN TKVTYVIQEA VIVIRDILRK 420
  421 YPGSYKSLVP ILYENLDSLD EPDAKSAVIW ILGQYAEEIE DSITLLNDYL KGFFDEPLEI 480
  481 QLTLLTAVIK VFLKKPTAAA DMVTNVLQWC TDEVNDPDLR DRGIIYSRML SANPELAKKV 540
  541 ILANMPPVNV GTGMYDPDTT EQLMLNISTL SSIYHKPPNR FVKGAQVAYC EPSPVLRLRT 600
  601 RDSNPSNTDS RESNHKKYNH FHQKSQTRRV MEQYDRNSWN PSPFSDESNS NTFSGKFDSA 660
  661 DQENLGMPMT PETHLMD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle